Publications

B. Haimov and S. Srebnik, “A closer look into the α-helix basin,” Scientific Reports, vol. 6, p. 38341, 2016.

H. Hecht and S. Srebnik, “Sequence-dependent association of alginate with sodium and calcium counterions,” Carbohydrate Polymers, 2016.

H. Hecht and S. Srebnik, “Structural characterization of sodium alginate and calcium alginate,” Biomacromolecules, vol. 17, no. 6, pp. 2160–2167, 2016.

V. Raim, I. Zadok, and S. Srebnik, “Comparison of descriptors for predicting selectivity of protein-imprinted polymers,” Journal of Molecular Recognition, 2016.

R. Edelman, I. Kusner, R. Kisiliak, S. Srebnik, and Y. D. Livney, “Sugar stereochemistry effects on water structure and on protein stability: The templating concept,” Food Hydrocolloids, vol. 48, pp. 27–37, 2015.

T.-P. Huynh, A. Wojnarowicz, M. Sosnowska, S. Srebnik, T. Benincori, F. Sannicolò, F. D’Souza, and W. Kutner, “Cytosine derivatized bis (2, 2′-bithienyl) methane molecularly imprinted polymer for selective recognition of 6-thioguanine, an antitumor drug,” Biosensors and Bioelectronics, vol. 70, pp. 153–160, 2015.

O. Kucher, I. Yungerman, and S. Srebnik, “Coarse-Grained Model for Sequence-Dependent Adsorption of ssDNA on Carbon Nanotubes,” The Journal of Physical Chemistry C, vol. 118, no. 31, pp. 17677–17685, 2014.

Y. Moskovitz and S. Srebnik, “Conformational changes of globular proteins upon adsorption on a hydrophobic surface,” Physical Chemistry Chemical Physics, vol. 16, no. 23, pp. 11698–11707, 2014.

Y. Moskovitz and S. Srebnik, “Thermal stability limits of proteins in solution and adsorbed on a hydrophobic surface,” Physical Chemistry Chemical Physics, vol. 14, no. 22, pp. 8013–8022, 2012.

L. Levi and S. Srebnik, “Simulation of protein-imprinted polymers. 3. Imprinting selectivity,” The Journal of Physical Chemistry B, vol. 115, no. 49, pp. 14469–14474, 2011.

L. Levi, V. Raim, and S. Srebnik, “A brief review of coarse-grained and other computational studies of molecularly imprinted polymers,” Journal of Molecular Recognition, vol. 24, no. 6, pp. 883–891, 2011.

S. Srebnik and J. F. Douglas, “Self-assembly of charged particles on nanotubes and the emergence of particle rings, chains, ribbons and chiral sheets,” Soft Matter, vol. 7, no. 15, pp. 6897–6905, 2011.

L. Levi and S. Srebnik, “Simulation of protein-imprinted polymers. 2. Imprinting efficiency,” The Journal of Physical Chemistry B, vol. 114, no. 50, pp. 16744–16751, 2010.

L. Levi and S. Srebnik, “Structural characterization of protein-imprinted gels using lattice Monte Carlo simulation,” in Macromolecular symposia, 2010, vol. 291, pp. 258–270.

S. Srebnik and L. Levi, “Can protein-imprinted polymers be used as selective binding assays?,” in APS Meeting Abstracts, 2010, vol. 1, p. 18008.

L. Levi and S. Srebnik, “Simulation of protein-imprinted polymers. 1. Imprinted Pore properties,” The Journal of Physical Chemistry B, vol. 114, no. 1, pp. 107–114, 2009.

R. Oizerovich-Honig, V. Raim, and S. Srebnik, “Simulation of thin film membranes formed by interfacial polymerization,” Langmuir, vol. 26, no. 1, pp. 299–306, 2009.

S. Srebnik, R. Matza, I. Kusner, and Y. D. Livney, “Structural effect of sugars on water,” in APS Meeting Abstracts, 2009, vol. 1, p. 15011.

S. Srebnik and M. Sheintuch, “Diffusion enhancement in composites of nanotubes and porous structures,” Molecular Simulation, vol. 35, no. 1–2, pp. 100–108, 2009.

S. Srebnik, “Physical association of polymers with nanotubes,” Journal of Polymer Science Part B: Polymer Physics, vol. 46, no. 24, pp. 2711–2718, 2008.

S. Srebnik, I. Gurevitz, S. Levchenko, and others, “Nanoscale ordering of polymer adsorbed on nanotubes,” in The 2008 Annual Meeting, 2008.

R. Nadler and S. Srebnik, “Molecular simulation of polyamide synthesis by interfacial polymerization,” Journal of Membrane Science, vol. 315, no. 1, pp. 100–105, 2008.

I. Gurevitch and S. Srebnik, “Conformational behavior of polymers adsorbed on nanotubes,” The Journal of chemical physics, vol. 128, no. 14, p. 144901, 2008.

I. Gurevitch and S. Srebnik, “Monte Carlo simulation of polymer wrapping of nanotubes,” Chemical Physics Letters, vol. 444, no. 1, pp. 96–100, 2007.

I. Kusner and S. Srebnik, “Vector imitation model of semiflexible polymers: Application to polymer adsorbed on a spherical particle,” Macromolecules, vol. 40, no. 17, pp. 6432–6438, 2007.

S. Srebnik, I. Yungerman, G. Kohav, and M. Sheintuch, “Activated diffusion in relaxed porous clusters,” Chemical engineering science, vol. 62, no. 8, pp. 2242–2253, 2007.

I. Kusner and S. Srebnik, “Conformational behavior of semi-flexible polymers confined to a cylindrical surface,” Chemical physics letters, vol. 430, no. 1, pp. 84–88, 2006.

H. Cooper, E. Segal, S. Srebnik, R. Tchoudakov, M. Narkis, and A. Siegmann, “Electrically conductive sensors for liquids based on quaternary ethylene vinyl acetate (EVA)/copolyamide/maleated-EVA/polyaniline blends,” Journal of applied polymer science, vol. 101, no. 1, pp. 110–117, 2006.

I. Yungerman and S. Srebnik, “Factors contributing to binding-site imperfections in imprinted polymers,” Chemistry of materials, vol. 18, no. 3, pp. 657–663, 2006.

E. Rossinsky and S. Srebnik, “Monte Carlo simulation of protein folding in the presence of residue-specific binding sites,” Biopolymers, vol. 79, no. 5, pp. 259–268, 2005.

S. Srebnik, “Phase behavior of physically cross-linked asymmetric random heteropolymers,” Physical Review E, vol. 72, no. 5, p. 051802, 2005.

Y. Moskovitz and S. Srebnik, “Mean-field model of immobilized enzymes embedded in a grafted polymer layer,” Biophysical journal, vol. 89, no. 1, pp. 22–31, 2005.

H. Cooper, E. Segal, S. Srebnik, R. Tchoudakov, M. Narkis, and A. Siegmann, “Electrically conductive sensors for liquids based on ternary immiscible polymer blends containing polyaniline,” Polymers for advanced technologies, vol. 15, no. 10, pp. 573–582, 2004.

Y. Moskovitz and S. Srebnik, “Stabilization of surface-immobilized enzymes using grafted polymers,” Physical Review E, vol. 70, no. 3, p. 032902, 2004.

S. Srebnik, “Theoretical investigation of the imprinting efficiency of molecularly imprinted polymers,” Chemistry of materials, vol. 16, no. 5, pp. 883–888, 2004.

S. Srebnik, “Polymer adsorption on multicomponent surfaces with relevance to membrane fouling,” Chemical engineering science, vol. 58, no. 23, pp. 5291–5298, 2003.

V. Freger and S. Srebnik, “Mathematical model of charge and density distributions in interfacial polymerization of thin films,” Journal of applied polymer science, vol. 88, no. 5, pp. 1162–1169, 2003.

S. Srebnik and O. Lev, “Theoretical investigation of imprinted crosslinked silicates,” Journal of sol-gel science and technology, vol. 26, no. 1–3, pp. 107–113, 2003.

S. Srebnik, “Induced porosity in cross-linked polymer networks: Mean field theory and simulations,” Studies in Surface Science and Catalysis, vol. 144, pp. 43–50, 2002.

S. Srebnik and O. Lev, “Toward establishing criteria for polymer imprinting using mean-field theory,” The Journal of chemical physics, vol. 116, no. 24, pp. 10967–10972, 2002.

A. D. Modestov, S. Srebnik, O. Lev, and J. Gun, “Scanning capillary microscopy/mass spectrometry for mapping spatial electrochemical activity of electrodes,” Analytical chemistry, vol. 73, no. 17, pp. 4229–4240, 2001.

S. Srebnik, “Solvent effects on heteropolymer adsorption and freezing,” The Journal of Chemical Physics, vol. 114, no. 20, pp. 9179–9183, 2001.

S. Srebnik, “Theoretical model of the porosity of copolymer membranes,” Journal of Membrane Science, vol. 184, no. 1, pp. 97–106, 2001.

S. Srebnik, O. Lev, and D. Avnir, “Pore size distribution induced by microphase separation: effect of the leaving group during polycondensation,” Chemistry of materials, vol. 13, no. 3, pp. 811–816, 2001.

S. Srebnik, “The role of segment interactions in pattern recognition between random heteropolymers and disordered surfaces,” The Journal of Chemical Physics, vol. 112, no. 21, pp. 9655–9660, 2000.

S. Srebnik, A. K. Chakraborty, and D. Bratko, “Random heteropolymer adsorption on disordered multifunctional surfaces: effect of specific intersegment interactions,” The Journal of chemical physics, vol. 109, no. 15, pp. 6415–6419, 1998.

S. Srebnik, A. K. Chakraborty, and E. I. Shakhnovich, “Adsorption-freezing transition for random heteropolymers near disordered 2d manifolds due to ‘pattern matching,’” Physical review letters, vol. 77, no. 15, p. 3157, 1996.